Iso-seq data for siamang from lymphoblast cell lines - SRA

SRX23110505: Iso-seq data for siamang from lymphoblast cell lines
1 PACBIO_SMRT (Sequel II) run: 600,718 spots, 1.5G bases, 686.8Mb downloads

Design: RNA was extracted from cultured siamang lymphoblast Jambi and processed following manufacturer's instruction.

Submitted by: University of Washington

Study: Long- and short-read RNA sequencing for ape genome annotation

PRJNA1016395 • SRP477373 • All experiments • All runs

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Long-read (PacBio Iso-Seq) and short-read (Illumina-based RNA-seq) RNA sequencing were performed for the purpose of genome annotation. The target genomes are cell lines sequenced for telomere-to-telomere genome references: bonobo (Pan paniscus), chimpanzee (Pan troglodytes), gorilla (Gorilla gorilla), Sumatran orangutan (Pongo abelii), Bornean orangutan (Pongo pygmaeus), siamang (Symphalangus syndactylus), and hoolock (Hoolock leuconedys).

Sample: Symphalangus syndactylus (Jambi) Cell Line

SAMN30216103 • SRS18242897 • All experiments • All runs

Organism: Symphalangus syndactylus

Library:

Name: Jambi_SSY_IS-1

Instrument: Sequel II

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA_oligo_dT

Layout: SINGLE

Runs: 1 run, 600,718 spots, 1.5G bases, 686.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR27438203	600,718	1.5G	686.8Mb	2024-01-06

ID:: 31221641

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